Publications

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2008
Ewald R, Himmelspach J, Uhrmacher A.  2008.  An Algorithm Selection Approach for Simulation Systems. Proc. ACM/IEEE/SCS Workshop on Principles of Advanced and Distributed Simulation PADS'08.
2009
Plake C, Royer L, Winnenburg R, Hakenberg J, Schroeder M.  2009.  GoGene: gene annotation on the fast lane. Nucleic Acid Research.
Dietze H, Alexopolou D, Alvers MR, Barrio-Alvers L, Andreopoulos B, Doms A, Hakenberg J, Mönnich J, Plake C, Reischuck A et al..  2009.  GoPubMed: Exploring PubMed with Ontological Background Knowledge. Bioinformatics for Systems Biology. Humana Press.
II MRJ, Guan Y, Hagen H, Böttger S, Kotava N, Wagner C.  2009.  Illustrative visualization: interrogating triangulated surfaces. Computing. :131-150.
Bosch H, Heinrich J, Höferlin B, Höferlin M, Koch S, Müller C, Reina G, Wörner M.  2009.  Innovative Filtering Techniques and Customized Analytics Tools. IEEE Symposium on Visual Analytics Science and Technology. Abstract
Höferlin B, Zimmermann K.  2009.  Towards Reliable Traffic Sign Recognition. Proceedings of IEEE Intelligent Vehicles Symposium '09. Abstract
Oliver H, Diallo G, de Quincey E, Kostkova P, Jawaheer G, Alexopolou D, Habermann B, Stevens R, Jupp S, Khelif K et al..  2009.  A User-Centered Evaluation Framework for the Sealife Semantic Web Browsers. BMC Bioinformatics.
Bak P, Rohrdantz C, Leifert S, Granacher C, Koch S, Butscher S, Jungk P, Keim DA, Bosch H, Heinrich J et al..  2009.  VAST Challenge Awards at VisWeek 2009 / Atlantic City.
Oeltze S, Hauser H, Rorvik J, Lundervold A, Preim B.  2009.  Visual Analysis of Cerebral Perfusion Data -- Four Interactive Approaches and a Comparison. Proc. of the 6th International Symposium on Image and Signal Processing and Analysis (ISPA). :588-595.
Dietzsch J, Heinrich J, Nieselt K, Bartz D.  2009.  A Visual Analytics Approach for Gene Expression Data. IEEE Symposium on Visual Analytics Science and Technology. Abstract
Nieselt K, Dietzsch J, Heinrich J, Pritzkau A, Mosisch M, Bartz D.  2009.  Visuelle Analytik für Genexpressionsdaten. Datenbank-Spektrum . Abstract
Mende S, Herr A, Schmiedel J, Deschauer M, Klopstock T, Kostic VS, Royer L, Schroeder M, Reichmann H, Storch A.  2009.  Whole blood genome-wide expression profiling of A3243G MELAS patients reveals alternative disease-modifying gene clusters.
Gehlenborg N, Baliga NS, Goesmann A, Hibbs. MA, Kitano H, Kohlbacher O, Neuweger H, Schneider R, Tenenbaum D, Gavin A.  2009.  Visualization of Omics Data for Systems Biology. Nature Methods.
Höferlin M, Höferlin B, Weiskopf D.  2009.  Video Visual Analytics of Tracked Moving Objects. Proceedings of 3rd Workshop on Behaviour Monitoring and Interpretation. 541:59--64. Abstract
Teresniak S, Heyer G, Scheuermann G, Holz F.  2009.  Visualisierung von Bedeutungsverschiebungen in gro. Datenbank-Spektrum. 31
Heyer G, Holz F, Teresniak S.  2009.  Change of Topics over Time and Tracking Topics by Their Change of Meaning. KDIR '09: Proc. of Int. Conf. on Knowledge Discovery and Information Retrieval.
2010
Kaeppeler U, Höferlin M, Levi P.  2010.  3D Object Localization via Stereo Vision using an Omnidirectional and a Perspective Camera. 2nd. Workshop on Omnidirectional Robot Vision, a workshop of the 2010 IEEE International Conference on Robotics and Automation (ICRA2010). :7--12.
Rueckert F, Dawelbait G, Winter C, Hartmann A, Schroeder M, Schackert HK, Sipos B, Kloeppel G, Kalthoff H, Saeger H-D et al..  2010.  Examination of Apoptosis Signaling in Pancreatic Cancer by Computational Signal Transduction Analysis. PLoS One.
Ewald R, Himmelspach J, Jeschke M, Leye S, Uhrmacher A.  2010.  Flexible Experimentation in the Modeling and Simulation Framework JAMES II - Implications for Computational Systems Biology. Briefings in Bioinformatics. 11:290-300.
Holz F, Teresniak S, Heyer G, Scheuermann G.  2010.  Generating a Visual Overview of Large Diachronic Document Collections based on the Detection of Topic Change. Proc. IVAPP 2010: International Conference on Information Visualization Theory and Applications.
Maisel M, Habisch H, Royer L, Herr A, Milosevic J, Liebau S, Brenner R, Schwarz J, Schroeder M, Storch A.  2010.  Genome-wide expression profiling and functional network analysis upon neuroectodermal conversion of human mesenchymal stem cells suggest HIF-1 and miR-124a as important regulators.. To appear in Experimental Cell Research.
Höferlin B, Höferlin M, Weiskopf D, Heidemann G.  2010.  Information-Based Adaptive Fast-Forward for Visual Surveillance. Multimedia Tools and Applications.
Marsico A, Scheubert K, Henschel A, Winter C, Winnenburg R, Tuukkanen A, Vassilev B, Schroeder M.  2010.  MeMotif: Structural fragment clustering reveals novel structural and functional motifs in alpha-helical transmembrane proteins.. Nucleic Acids Research. :D181--D189.
Höferlin B, Heidemann G.  2010.  Selection of an Optimal Set of Discriminative and Robust Local Features with Application to Traffic Sign Recognition. WSCG 2010, 18th International Conference in Central Europe on Computer Graphics, Visualization and Computer Vision.
Marsico A, Henschel A, Winter C, Tuukkanen A, Vassilev B, Scheubert K, Schroeder M.  2010.  Structural fragment clustering reveals novel structural and functional motifs in alpha-helical transmembrane proteins.. BMC Bioinformatics.