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Marsico A, Scheubert K, Henschel A, Winter C, Winnenburg R, Tuukkanen A, Vassilev B, Schroeder M.  2010.  MeMotif: Structural fragment clustering reveals novel structural and functional motifs in alpha-helical transmembrane proteins.. Nucleic Acids Research. :D181--D189.
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Höferlin B, Pflüger H, Höferlin M, Heidemann G, Weiskopf D.  2012.  Learning a Visual Attention Model for Adaptive Fast-Forward in Video Surveillance. Proceedings of International Conference on Pattern Recognition Applications and Methods (ICPRAM). 2:25--32.
Burch M, Höferlin M, Weiskopf D.  2011.  Layered TimeRadarTrees. In Proceedings of 15th International Conference on Information Visualization (IV).
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Sauer U, Kneuer C, Tentschert J, Wächter T, Schroeder M, Luch A, Liebsch M, Grune B, Goetz ME.  2010.  A knowledge-based search engine to navigate the information thicket of nanotoxicology. Regulatory Toxicology and Pharmacology.
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Kurzhals K, Heimerl F, Weiskopf D.  2014.  ISeeCube - Visual Analysis of Gaze Data for Video. Proceedings of the 2014 Symposium on Eye Tracking Research and Applications (ETRA). :43–50.
Höferlin M, Höferlin B, Heidemann G, Weiskopf D.  2013.  Interactive Schematic Summaries for Faceted Exploration of Surveillance Video. IEEE Transactions on Multimedia 15. 4:908-920.
Höferlin M, Höferlin B, Weiskopf D, Heidemann G.  2011.  Interactive Schematic Summaries for Exploration of Surveillance Video. ACM International Conference on Multimedia Retrieval (ICMR). :9:1--9:8.
Bremm S, von Landesberger T, Heß M, Schreck T, Weil P, Hamacher K.  2011.  Interactive Comparison of Multiple Trees. IEEE Symposium on Visual Analytics Science and Technology.
Höferlin B, Höferlin M, Raschke M, Heidemann G, Weiskopf D.  2011.  Interactive Auditory Display to Support Situational Awareness in Video Surveillance. In Proceedings of the International Conference on Auditory Display (ICAD).
Höferlin B, Netzel R, Höferlin M, Weiskopf D, Heidemann G.  2012.  Inter-Active Learning of Ad-Hoc Classifiers for Video Visual Analytics. IEEE Conference on Visual Analytics Science and Technology (VAST).
Bosch H, Heinrich J, Höferlin B, Höferlin M, Koch S, Müller C, Reina G, Wörner M.  2009.  Innovative Filtering Techniques and Customized Analytics Tools. IEEE Symposium on Visual Analytics Science and Technology. Abstract
Höferlin B, Höferlin M, Weiskopf D, Heidemann G.  2010.  Information-Based Adaptive Fast-Forward for Visual Surveillance. Multimedia Tools and Applications.
Tönnies KD, Gloger O, Rak M, Winkler C, Klemm P, Preim B, Völzke H.  2015.  Image analysis in epidemiological applications. it - Information Technology. 57:22-29.
II MRJ, Guan Y, Hagen H, Böttger S, Kotava N, Wagner C.  2009.  Illustrative visualization: interrogating triangulated surfaces. Computing. :131-150.
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Burch M, Raschke M, Blascheck T, Kurzhals K, Weiskopf D.  2014.  How Do People Read Metro Maps? An Eye Tracking Study Proceedings of 1st International Workshop on Schematic Mapping.
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Dietze H, Alexopolou D, Alvers MR, Barrio-Alvers L, Andreopoulos B, Doms A, Hakenberg J, Mönnich J, Plake C, Reischuck A et al..  2009.  GoPubMed: Exploring PubMed with Ontological Background Knowledge. Bioinformatics for Systems Biology. Humana Press.
Plake C, Royer L, Winnenburg R, Hakenberg J, Schroeder M.  2009.  GoGene: gene annotation on the fast lane. Nucleic Acid Research.
Sauer U, Wächter T, Grune B, Doms A, Alvers MR, Spielmann H, Schroeder M.  2009.  Go3R - Semantic Internet Search Engine for Alternative Methods to Animal Testing. ALTEX.
Krstajic M, Rohrdantz C, Hund M, Weiler A.  2012.  Getting There First: Real-Time Detection of Real-World Incidents on Twitter. 2nd IEEE Workshop on Interactive Visual Text Analytics ”Task-Driven Analysis of Social Media” as part of the IEEE VisWeek 2012.
Kurzhals K, Hlawatsch M, Heimerl F, Burch M, Ertl T, Weiskopf D.  2016.  Gaze Stripes: Image-Based Visualization of Eye Tracking Data. IEEE Transactions on Visualization and Computer Graphics. 22:1005–1014.
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Andrienko G, Andrienko N, Hurter C, Rinzivillo S, Wrobel S.  2011.  From Movement Tracks through Events to Places: Extracting and Characterizing Significant Places from Mobility Data (best paper award). IEEE Visual Analytics Science and Technology (VAST 2011) Proceedings. :161-170.
Gubichev A, Bedathur S, Seufert S, Weikum G.  2010.  Fast and Accurate Estimation of Shortest Paths in Large Graphs. Proceedings of the 19th ACM International Conference on Information and Knowledge Management (CIKM'2010), Toronto, Canada..
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Kurzhals K, Weiskopf D.  2015.  Eye Tracking for Personal Visual Analytics. Computer Graphics and Applications.
Kossow C, Rybacki S, Millat T, Rateitschak K, Jaster R, Uhrmacher A, Wolkenhauer O.  2015.  An explicit numerical scheme to efficiently simulate molecular diffusion in environments with dynamically changing barriers. Mathematical and Computer Modelling of Dynamical Systems. 21(6)
Rueckert F, Dawelbait G, Winter C, Hartmann A, Schroeder M, Schackert HK, Sipos B, Kloeppel G, Kalthoff H, Saeger H-D et al..  2010.  Examination of Apoptosis Signaling in Pancreatic Cancer by Computational Signal Transduction Analysis. PLoS One.