Publications

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2008
Keller A, Backes C, Al-Awadhi M, Gerasch A, Kuntzer J, Kohlbacher O, Kaufmann M, Lenhof H.  2008.  GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments. BMC Bioinformatics. 9:552. Abstract
2009
Andrienko N, Andrienko G, Bak P, Kisilevich S, Keim DA.  2009.  Analysis of community-contributed space- and time-referenced data (example of flickr and panoramio photos). IEEE Visual Analytics Science and Technology (VAST 2009). Abstract
Andrienko G, Andrienko N, Bak P, Kisilevich S, Keim DA.  2009.  Analysis of community-contributed space- and time-referenced data by example of Panoramio photos. Vision, Modeling, and Visualization Workshop (VMV).
Bielow C, Gröpl C, Kohlbacher O, Reinert K.  2009.  Bioinformatics for Proteomics. Bioinformatics for Omics data.
Tatu A, Albuquerque G, Eisemann M, Schneidewind J, Theisel H, Magnor M, Keim DA.  2009.  Combining automated analysis and visualization techniques for effective exploration of high-dimensional data. IEEE Visual Analytics Science and Technology (VAST 2009). Abstract
Bak P, Schaefer M, Stoffel A, Keim DA, Omer I.  2009.  Density Equalizing Distortion of Large Geographic Point Sets. Cartographic and Geographic Information Science. 36
II MRJ, Guan Y, Hagen H, Böttger S, Kotava N, Wagner C.  2009.  Illustrative visualization: interrogating triangulated surfaces. Computing. :131-150.
Bosch H, Heinrich J, Höferlin B, Höferlin M, Koch S, Müller C, Reina G, Wörner M.  2009.  Innovative Filtering Techniques and Customized Analytics Tools. IEEE Symposium on Visual Analytics Science and Technology. Abstract
Koch S, Bosch H, Giereth M, Ertl T.  2009.  Iterative Integration of Visual Insights during Patent Search and Analysis. IEEE Symposium on Visual Analytics Science and Technology. Abstract
Keller A, Backes C, Gerasch A, Kaufmann M, Kohlbacher O, Lenhof H.  2009.  A novel algorithm for detecting differentially regulated paths based on Gene Set Enrichment Analysis. Bioinformatics. Abstract
Albrecht M, Kerren A, Klein K, Kohlbacher O, Mutzel P, Paul W, Schreiber F, Wybrow M.  2009.  On open problems in biological network visualization. Proceedings of the International Symposium on Graph Drawing. Abstract
Bak P, Mansmann F, Jantzko H, Keim DA.  2009.  Spatiotemporal Analysis of Sensor Logs Using Growth-Ring Maps. IEEE Transactions on Computer Graphics and Visualization. 15
Preissner S, Kroll K, Dunkel M, Senger C, Goldsobel G, Kuzman D, Guenther S, Winnenburg R, Schroeder M, Preissner R.  2009.  SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions. Nucleic Acids Research.
Oliver H, Diallo G, de Quincey E, Kostkova P, Jawaheer G, Alexopolou D, Habermann B, Stevens R, Jupp S, Khelif K et al..  2009.  A User-Centered Evaluation Framework for the Sealife Semantic Web Browsers. BMC Bioinformatics.
Bak P, Rohrdantz C, Leifert S, Granacher C, Koch S, Butscher S, Jungk P, Keim DA, Bosch H, Heinrich J et al..  2009.  VAST Challenge Awards at VisWeek 2009 / Atlantic City.
Mende S, Herr A, Schmiedel J, Deschauer M, Klopstock T, Kostic VS, Royer L, Schroeder M, Reichmann H, Storch A.  2009.  Whole blood genome-wide expression profiling of A3243G MELAS patients reveals alternative disease-modifying gene clusters.
Gehlenborg N, Baliga NS, Goesmann A, Hibbs. MA, Kitano H, Kohlbacher O, Neuweger H, Schneider R, Tenenbaum D, Gavin A.  2009.  Visualization of Omics Data for Systems Biology. Nature Methods.
Andrienko G, Andrienko N, Bak P, Kisilevich S, Keim DA.  2009.  Demo-Paper: Analysis of community-contributed space- and time-referenced data (by example of Panoramio photos). ACM-GIS Conference. Abstract
2010
Kaeppeler U, Höferlin M, Levi P.  2010.  3D Object Localization via Stereo Vision using an Omnidirectional and a Perspective Camera. 2nd. Workshop on Omnidirectional Robot Vision, a workshop of the 2010 IEEE International Conference on Robotics and Automation (ICRA2010). :7--12.
Jankowski P, Andrienko N, Andrienko G, Kisilevich S.  2010.  Discovering Landmark Preferences and Movement Patterns from Photo Postings Transaction. GIS.
Rueckert F, Dawelbait G, Winter C, Hartmann A, Schroeder M, Schackert HK, Sipos B, Kloeppel G, Kalthoff H, Saeger H-D et al..  2010.  Examination of Apoptosis Signaling in Pancreatic Cancer by Computational Signal Transduction Analysis. PLoS One.
Andrienko G, Andrienko N, Bak P, Bremm S, Keim DA, von Landesberger T, Pölitz C, Schreck T.  2010.  A Framework for Using Self-Organizing Maps to Analyze Spatio-Temporal Patterns, Exemplified by Analysis of Mobile Phone Usage. Journal of Location Based Services.
Koch S, Bosch H.  2010.  From static textual display of patents to graphical interactions. Current Challenges in Patent Information Retrieval.
Kisilevich S, Keim DA, Rokach L.  2010.  GEO-SPADE: A generic google-earth based framework for analysis and exploration of spatiotemporal data.. 12th International Conference on Enterprise Information Systems. :13-20.
Koch S, Bosch H, Giereth M, Ertl T.  2010.  Iterative Integration of Visual Insights during Scalable Patent Search and Analysis. IEEE Transactions on Visualization and Computer Graphics.