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Publications
Filters: Project is [Project Phase 2] Network-based interactive navigation and analysis of large biological datasets [Clear All Filters]
Detecting Dysregulated Processes and Pathways. Nucleic Acids as Molecular Diagnostics. :309-324.
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2015.
NetworkTrail--a web service for identifying and visualizing deregulated subnetworks. Bioinformatics (Oxford, England). 29(13):1702-3.
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2013.
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2014.
Boundary Labeling Methods for Dynamic Focus Regions. Pacific Visualization Symposium (PacificVis), 2014 IEEE. :243-247.
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2014.
The mzTab Data Exchange Format: communicating MS-based proteomics and metabolomics experimental results to a wider audience. Mol. Cell. Prot.. :2765-2775.
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2014.
Rebuilding KEGG Maps - An integrative approach for visual analytics of metabolic networks. PacificVis 2014. :97-104.
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2014.
Network-based interactive navigation and analysis of large biological datasets. it - Information Technology. 57(1):37-48.
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2015.
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2012.
Bioinformatics for Qualitative and Quantitative Proteomics. Bioinformatics for Omics Data: Methods and Protocols. :1-19.
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2011.
A note on maximum differential coloring of planar graphs. Journal of Discrete Algorithms. 29:1-7.
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2014.
Smooth Orthogonal Layouts. Journal of Graph Algorithms and Applications. 17:575-595.
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2013.
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2014.
An integer linear programming approach for finding deregulated subgraphs in regulatory networks. Nucleic Acids Res. 40(6):e43
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2011.
Fitting Planar Graphs on Planar Maps. SOFSEM 2014: Theory and Practice of Computer Science. 8327:52-64.
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2014.