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Publications
Filters: Project is [Project Phase 2] Developing new visual analysis methods to be integrated into simulation processes focusing on the exploration of cell biological systems in space and time [Clear All Filters]
Supporting the Visual Analysis of Dynamic Networks by Clustering associated Temporal Attributes. IEEE Transactions on Visualization and Computer Graphics. 19(12):2267--2276.
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2013.
In Situ Exploration of Large Dynamic Networks. IEEE Transactions on Visualization and Computer Graphics. 17(12):2334--2343.
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2011.
An adaptive simulator for ML-rules. :Poster@WinterSimulationConference(WSC'12).
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2012.
Toward a language for the flexible observation of simulations. Proc. of the Winter Simulation Conference (WSC'12).
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2012.
A Generic Adaptive Simulation Algorithm for Component-based Simulation Systems. ACM Transactions on Modeling and Computer Simulation. 1(2)
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2014.
Automatic Runtime Adaptation for Component-Based Simulation Algorithms. ACM Trans. Model. Comput. Simul.. 26(1):7:1–7:24.
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2015.
A Generic Adaptive Simulation Algorithm for Component-based Simulation Systems. Proceedings of the 2013 ACM SIGSIM conference on Principles of advanced discrete simulation.
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2013.
An Approximate Execution of Rule-Based Multi-level Models. Computational Methods in Systems Biology. 8130:19--32.
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2013.
Visualizing Uncertainty in Biological Expression Data. Proceedings of the Conference on Visualization and Data Analysis (VDA'12).
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2012.
Exploring the Performance of Spatial Stochastic Simulation Algorithms. Journal of Computational Physics.
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2011.
Constructing and Visualizing Chemical Reaction Networks from Pi-Calculus Models. to appear in Formal Aspects of Computing.
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2012.
Constructing and Visualizing Chemical Reaction Networks from Pi-Calculus Models. Formal Aspects of Computing. 25(5):723--742.
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2013.
An explicit numerical scheme to efficiently simulate molecular diffusion in environments with dynamically changing barriers. Mathematical and Computer Modelling of Dynamical Systems. 21(6)
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2015.
StratomeX: Visual Analysis of Large-Scale Heterogeneous Genomics Data for Cancer Subtype Characterization. Computer Graphics Forum. 31(3):1175--1184.
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2012.
VisBricks: Multiform Visualization of Large, Inhomogeneous Data. IEEE Transactions on Visualization and Computer Graphics. 17(12):2291--2300.
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2011.
Heterogeneity-based guidance for exploring multiscale data in Systems Biology. Proceedings of the IEEE Symposium on Biological Data Visualization (BioVis'12).
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2012.
Supporting an Early Detection of Diabetic Neuropathy by Visual Analytics. EuroVis Workshop on Visual Analytics.
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2014.
Interactive Visual Exploration of Simulator Accuracy: A Case Study for Stochastic Simulation Algorithms. Proceedings of the Winter Simulation Conference (WSC'2012).
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2012.
Supporting the Integrated Visual Analysis of Input Parameters and Simulation Trajectories. Computers & Graphics.
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2013.
Feature-Driven Visual Analytics of Chaotic Parameter-Dependent Movement. Computer Graphics Forum. 34(3)
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2015.
Towards Interactive Visual Analysis of Microscopic-Level Simulation Data. Proceedings of the Annual SIGRAD Conference, Special Theme: Interactive Visual Analysis of Data.
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2012.