Publications

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2010
Plake C, Schroeder M.  2010.  Computational Polypharmacology with Text Mining and Ontologies. Current Pharmaceutical Biotechnology.
Rueckert F, Dawelbait G, Winter C, Hartmann A, Schroeder M, Schackert HK, Sipos B, Kloeppel G, Kalthoff H, Saeger H-D et al..  2010.  Examination of Apoptosis Signaling in Pancreatic Cancer by Computational Signal Transduction Analysis. PLoS One.
Gubichev A, Bedathur S, Seufert S, Weikum G.  2010.  Fast and Accurate Estimation of Shortest Paths in Large Graphs. Proceedings of the 19th ACM International Conference on Information and Knowledge Management (CIKM'2010), Toronto, Canada..
Andrienko G, Andrienko N, Bak P, Bremm S, Keim DA, von Landesberger T, Pölitz C, Schreck T.  2010.  A Framework for Using Self-Organizing Maps to Analyze Spatio-Temporal Patterns, Exemplified by Analysis of Mobile Phone Usage. Journal of Location Based Services.
Andrienko G, Andrienko N, Giannotti F, Monerale A, Pedreschi D, Rinzivillo S.  2010.  A Generalisation-based Approach to Anonymising Movement Data. Geospatial Thinking, AGILE 2010.
Holz F, Teresniak S, Heyer G, Scheuermann G.  2010.  Generating a Visual Overview of Large Diachronic Document Collections based on the Detection of Topic Change. Proc. IVAPP 2010: International Conference on Information Visualization Theory and Applications.
Maisel M, Habisch H, Royer L, Herr A, Milosevic J, Liebau S, Brenner R, Schwarz J, Schroeder M, Storch A.  2010.  Genome-wide expression profiling and functional network analysis upon neuroectodermal conversion of human mesenchymal stem cells suggest HIF-1 and miR-124a as important regulators.. To appear in Experimental Cell Research.
Sauer U, Kneuer C, Tentschert J, Wächter T, Schroeder M, Luch A, Liebsch M, Grune B, Goetz ME.  2010.  A knowledge-based search engine to navigate the information thicket of nanotoxicology. Regulatory Toxicology and Pharmacology.
Marsico A, Scheubert K, Henschel A, Winter C, Winnenburg R, Tuukkanen A, Vassilev B, Schroeder M.  2010.  MeMotif: Structural fragment clustering reveals novel structural and functional motifs in alpha-helical transmembrane proteins.. Nucleic Acids Research. :D181--D189.
Jochim C, Koch S, Lioma C, Schütze H, Ertl T.  2010.  Preliminary Study into Query Translation for Patent Retrieval. PaIR.
Wächter T, Schroeder M.  2010.  Semi-automated ontology generation within OBO-Edit.. Bioinformatics. :i88--i96.
Spehr M, Viergutz A, Gumhold S.  2010.  A Semi-Automatic Image Morphing Technique for Biological Images. EG Workshop VCBM 2010 (Poster).
Andrienko G, Andrienko N, Demar U, Dransch D, Dykes J, Fabrikant S, Jern M, Kraak M-J, Schumann H, Tominski C.  2010.  Space, Time, and Visual Analytics. International Journal Geographical Information Science. :pp.1577-1600.
Andrienko G, Andrienko N, Bremm S, Schreck T, von Landesberger T, Keim DA, Bak P.  2010.  Space-in-Time and Time-in-Space Self-Organizing Maps for Exploring Spatiotemporal Patterns. EuroVis 2010. :913-922.
Marsico A, Henschel A, Winter C, Tuukkanen A, Vassilev B, Scheubert K, Schroeder M.  2010.  Structural fragment clustering reveals novel structural and functional motifs in alpha-helical transmembrane proteins.. BMC Bioinformatics.
Tuukkanen A, Henschel A, Huang B, Stewart AF, Schroeder M.  2010.  Structural Modeling of histone methyltransferase complex Set1C from Saccharomyces cerevisiae using constraint-based docking. Proteomics.
von Landesberger T, Schreck T, Bremm S.  2010.  Techniques for precision-based visual analysis of projected data. Information Visualization. 9:181-193(13). Abstract
Schreck T, von Landesberger T, Bremm S.  2010.  Techniques for Precision-Based Visual Analysis of Projected Data.. IS&T/SPIE Conference on Visualization and Data Analysis (VDA 2010). Abstract
Oesterling P, Scheuermann G, Teresniak S, Heyer G, Koch S, Ertl T, Weber GH.  2010.  Two-stage Framework for a Topology-Based Projection and Visualization of Classified Document Collections. IEEE Conference on Visual Analytics Science and Technology (IEEE VAST).
Oesterling P, Heine C, Jänicke H, Scheuermann G.  2010.  Visual Analysis of High Dimensional Point Clouds Using Topological Landscapes. IEEE Pacific Visualization 2010 Proceedings.
von Landesberger T, Kuijper A, Schreck T, Kohlhammer J, vanWijk J, Fekete J-D, Fellner D.  2010.  Visual Analysis of Large Graphs. Eurographics.
Raffaeta A, Leonardi L, Marketos G, Andrienko G, Andrienko N, Frentzos E, Giatrakos N, Orlando S, Pelekis N, Roncato A et al..  2010.  Visual Mobility Analysis using T-Warehouse. International Journal of Data Warehousing and Mining.
Lehmann DJ, Albuquerque G, Eisemann M, Tatu A, Keim DA, Schumann H, Magnor M, Theisel H.  2010.  Visualisierung und Analyse multi-dimensionaler Datensätze. Informatik Spektrum.
Rohrdantz C, Koch S, Jochim C, Heyer G, Scheuermann G, Ertl T, Schütze H, Keim DA.  2010.  Visuelle Textanalyse. Informatik Spektrum.
Mende S, Royer L, Herr A, Schmiedel J, Deschauer M, Klopstock T, Kostic VS, Schroeder M, Reichmann H, Storch A.  2010.  Whole blood genome-wide expression profiling and network analysis suggest MELAS master regulators. Neurological Research.