Publications

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2008
Keller A, Backes C, Al-Awadhi M, Gerasch A, Kuntzer J, Kohlbacher O, Kaufmann M, Lenhof H.  2008.  GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments. BMC Bioinformatics. 9:552. Abstract
2009
Bielow C, Gröpl C, Kohlbacher O, Reinert K.  2009.  Bioinformatics for Proteomics. Bioinformatics for Omics data.
Sauer U, Wächter T, Grune B, Doms A, Alvers MR, Spielmann H, Schroeder M.  2009.  Go3R - Semantic Internet Search Engine for Alternative Methods to Animal Testing. ALTEX.
II MRJ, Guan Y, Hagen H, Böttger S, Kotava N, Wagner C.  2009.  Illustrative visualization: interrogating triangulated surfaces. Computing. :131-150.
Andrienko G, Andrienko N, Rinzivillo S, Nanni M, Pedreschi D, Giannotti F.  2009.  Interactive Visual Clustering of Large Collections of Trajectories. IEEE Visual Analytics Science and Technology. Abstract
Koch S, Bosch H, Giereth M, Ertl T.  2009.  Iterative Integration of Visual Insights during Patent Search and Analysis. IEEE Symposium on Visual Analytics Science and Technology. Abstract
Keller A, Backes C, Gerasch A, Kaufmann M, Kohlbacher O, Lenhof H.  2009.  A novel algorithm for detecting differentially regulated paths based on Gene Set Enrichment Analysis. Bioinformatics. Abstract
Preissner S, Kroll K, Dunkel M, Senger C, Goldsobel G, Kuzman D, Guenther S, Winnenburg R, Schroeder M, Preissner R.  2009.  SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions. Nucleic Acids Research.
von Landesberger T, Görner M, Rehner R, Schreck T.  2009.  A System for Interactive Visual Analysis of Large Graphs Using Motifs in Graph Editing and Aggregation. Vision Modeling Visualization Workshop (VMV 2009) (accepted). Abstract
Bak P, Rohrdantz C, Leifert S, Granacher C, Koch S, Butscher S, Jungk P, Keim DA, Bosch H, Heinrich J et al..  2009.  VAST Challenge Awards at VisWeek 2009 / Atlantic City.
von Landesberger T, Görner M, Schreck T.  2009.  Visual Analysis of Graphs with Multiple Connected Components. IEEE Symposium on Visual Analytics Science and Technology (VAST 2009).
Gehlenborg N, Baliga NS, Goesmann A, Hibbs. MA, Kitano H, Kohlbacher O, Neuweger H, Schneider R, Tenenbaum D, Gavin A.  2009.  Visualization of Omics Data for Systems Biology. Nature Methods.
Andrienko N, Andrienko G, Giannotti F, Monreale A, Pedreschi D.  2009.  Movement Data Anonymity through Generalization. Proceedings of 2nd SIGSPATIAL ACM GIS 2009 International Workshop on Security and Privacy in GIS and LBS. Abstract
Glaßer S, Schäfer S, Oeltze S, Preim U, Tönnies KD, Preim B.  2009.  A Visual Analytics Approach to Diagnosis of Breast DCE-MRI Data. {Proc. on Vision, Modeling, and Visualization (VMV)}. :351–362. Abstract
2010
Miklos B, Giesen J, Pauly M.  2010.  Discrete Scale Axis Representations for 3D Geometry. Proceedings of the 37th International Conference and Exhibition on Computer Graphics and Interactive Techniques (SIGGRAPH).
Rueckert F, Dawelbait G, Winter C, Hartmann A, Schroeder M, Schackert HK, Sipos B, Kloeppel G, Kalthoff H, Saeger H-D et al..  2010.  Examination of Apoptosis Signaling in Pancreatic Cancer by Computational Signal Transduction Analysis. PLoS One.
Gubichev A, Bedathur S, Seufert S, Weikum G.  2010.  Fast and Accurate Estimation of Shortest Paths in Large Graphs. Proceedings of the 19th ACM International Conference on Information and Knowledge Management (CIKM'2010), Toronto, Canada..
Andrienko G, Andrienko N, Giannotti F, Monerale A, Pedreschi D, Rinzivillo S.  2010.  A Generalisation-based Approach to Anonymising Movement Data. Geospatial Thinking, AGILE 2010.
Koch S, Bosch H, Giereth M, Ertl T.  2010.  Iterative Integration of Visual Insights during Scalable Patent Search and Analysis. IEEE Transactions on Visualization and Computer Graphics.
Sauer U, Kneuer C, Tentschert J, Wächter T, Schroeder M, Luch A, Liebsch M, Grune B, Goetz ME.  2010.  A knowledge-based search engine to navigate the information thicket of nanotoxicology. Regulatory Toxicology and Pharmacology.
Monreale A, Andrienko G, Andrienko N, Giannotti F, Pedreschi D, Rinzivillo S, Wrobel S.  2010.  Movement Data Anonymity through Generalization. Transactions on Data Privacy. :pp.91-121.
Spehr M, Viergutz A, Gumhold S.  2010.  A Semi-Automatic Image Morphing Technique for Biological Images. EG Workshop VCBM 2010 (Poster).
Holz F, Teresniak S.  2010.  Towards Automatic Detection and Tracking of Topic Change. Proc. CICLing 2010, Ia?i: Conference on Intelligent Text Processing and Computational Linguistics, LNCS 6008.
Höferlin M, Grundy E, Borgo R, Weiskopf D, Chen M, Griffiths IW, Griffiths W.  2010.  Video Visualization for Snooker Skill Training. Computer Graphics Forum.
Glaßer S, Preim U, Tönnies KD, Preim B.  2010.  A visual analytics approach to diagnosis of breast DCE-MRI data. Computer and Graphics. :602-611.